The Identification of First COVID-19 Cluster in Indonesia.
Identifieur interne : 000054 ( Main/Exploration ); précédent : 000053; suivant : 000055The Identification of First COVID-19 Cluster in Indonesia.
Auteurs : Vivi Setiawaty [Indonésie] ; Herman Kosasih [Indonésie] ; Yan Mardian [Indonésie] ; Emita Ajis [Indonésie] ; Endang Burni Prasetyowati [Indonésie] ; Siswanto [Indonésie] ; Muhammad Karyana [Indonésie] ; Sars-CoV-Reference Laboratory Ministry Of Health IndonesiaSource :
- The American journal of tropical medicine and hygiene [ 1476-1645 ] ; 2020.
Abstract
We describe the first 11 detected COVID-19 cases in Indonesia, resulting from a local transmission occurring in a club and a restaurant. The virus was detected until an average of 21.3 days (range: 11-25, SD: 4.1) after the onset of illness, and the partial N gene sequences (28,321-28,707 nucleotide position) had 100% similarity with the SARS-CoV-2 sequence from Wuhan. Two subjects were asymptomatic, and one subject has died.
DOI: 10.4269/ajtmh.20-0554
PubMed: 33069265
PubMed Central: PMC7695062
Affiliations:
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<front><div type="abstract" xml:lang="en">We describe the first 11 detected COVID-19 cases in Indonesia, resulting from a local transmission occurring in a club and a restaurant. The virus was detected until an average of 21.3 days (range: 11-25, SD: 4.1) after the onset of illness, and the partial <i>N</i>
gene sequences (28,321-28,707 nucleotide position) had 100% similarity with the SARS-CoV-2 sequence from Wuhan. Two subjects were asymptomatic, and one subject has died.</div>
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<ReferenceList><Reference><Citation>Science. 2013 Mar 15;339(6125):1287-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23493705</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Viruses. 2018 Feb 24;10(2):</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29495250</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>N Engl J Med. 2006 Nov 23;355(21):2186-94</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17124016</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2020 Aug;26(8):</Citation>
<ArticleIdList><ArticleId IdType="pubmed">32396505</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Emerg Infect Dis. 2020 Aug;26(8):1917-1920</Citation>
<ArticleIdList><ArticleId IdType="pubmed">32412896</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Clin Infect Dis. 2020 Dec 3;71(9):2311-2313</Citation>
<ArticleIdList><ArticleId IdType="pubmed">32628269</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>N Engl J Med. 2020 Feb 20;382(8):727-733</Citation>
<ArticleIdList><ArticleId IdType="pubmed">31978945</ArticleId>
</ArticleIdList>
</Reference>
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